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Table 3.

Gene families mis-regulated in deps- 1 germ lines

Family*Genes
T21G5.3, C55B7.1 
Y19D10A. 12, C01B4.9 
Y19D10A.4, C01B4.7 
Y19D10A. 16, C01B4.6 
W09B7.2,F07B7.2 
C38D9.2, F15D4.5 
W09B7.1,F07B7.1 
W03G1.3, K02B7.2, K02E7.2,Y55F3C.11 
 R09E12.5,C17B7.13K07E8.10 
W03G1.4, K02B7.1, K02E7.3, Y55F3C.6, R09E12.6, C17B7.7 
10 F41G4.7, ZC15.3 
11 C33H5.4, C06G3.2 
12 D2045.2, H04D03.3 
13 Y55H10B.1, F57G4.3,Y71A12B.7 
Family*Genes
T21G5.3, C55B7.1 
Y19D10A. 12, C01B4.9 
Y19D10A.4, C01B4.7 
Y19D10A. 16, C01B4.6 
W09B7.2,F07B7.2 
C38D9.2, F15D4.5 
W09B7.1,F07B7.1 
W03G1.3, K02B7.2, K02E7.2,Y55F3C.11 
 R09E12.5,C17B7.13K07E8.10 
W03G1.4, K02B7.1, K02E7.3, Y55F3C.6, R09E12.6, C17B7.7 
10 F41G4.7, ZC15.3 
11 C33H5.4, C06G3.2 
12 D2045.2, H04D03.3 
13 Y55H10B.1, F57G4.3,Y71A12B.7 
*

Gene families 2-5 and 7-9 have members with aligned sequences that are≥99% identical. The sole exception is K07E8. 10, which is 94% identical to the other members of gene family 8. Other gene families are 86-96% (10-13) or 70-78% (1, 6) identical. Genes with less than 70% identity to other family members are not listed. Alignments were generated using genomic sequences and ClustalW (Chenna et al.,2003).

Genes in bold were mis-regulated at least 1.8-fold (P<0.05,corrected z-test, Table 2). Genes in italics are co-regulated with other gene family members, but these changes are only statistically significant according to a less stringent statistical test (P<0.05, unpaired 2-tailed t-test).

Not independently represented on the microarrays.

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