Table 1.

Signaling genes that show significant temporal regulation in mouse intestine development

Tag number
SAGE tagE12E13E15P_12 v 13P_13 v 15Unigene Mm.Gene symbol (and name or description)
GGCTTCCGCG 24 62 13 4.3E-05 906 Mdk (midkine) 
TAGTTCCGAC 11 29 11 0.00571 0.003967 30195 Gps1 (G protein pathway suppressor 1) 
CATTTTCTGG 101 60 30 0.00026 0.001459 3862 Igf2 (insulin-like growth factor 2) 
TAACCGTTTT 32 25 0.1594 0.001269 273117 Grb10 (growth factor receptor bound protein 10) 
GAAGGTTCTA 12 11 0.42377 0.012708 289681 Dtr (diphtheria toxin receptor) 
GGGACCGAAA 32 32 0.6218 0.000313 302504 Rbp1 (retinol binding protein 1, cellular) 
GAAAGCAATG 28 30 13 0.58273 0.009037 90787 Ngfrap1 [nerve growth factor receptor (TNFRSF16) associated protein 1] 
GGCAGATGGA 0.23288 0.010862 3542 Pthr1 (parathyroid hormone receptor 1) 
TCCCTGACTT 12 23 0.0601 8.33E-05 2769 Mlp (MARCKS-like protein) 
GGTTTTGTTT 12 0.04861 0.001818 307022 Wsb1 (WD-40-repeat-containing protein with a SOCS box 1) 
CCCCTCTTCC 10 21 0.05677 0.000193 292208 Hdgf (hepatoma-derived growth factor) 
GGGAACAACT 0.08066 0.010862 8687 Cap1 [adenylyl cyclase-associated CAP protein homolog 1 (S. cerevisiae, S. pombe)] 
ATAATGAATA 31 43 15 0.14153 0.00018 157069 Dlk1 [delta-like 1 homolog (Drosophila)] 
TGGGGACCTG 11 0.07143 0.012708 2402 Rhoip3 (Rho interacting protein 3; AA536749 – Mouse Genome Informatics) 
GAGGACCTGG 0.07374 0.004647 258771 Ptprs (protein tyrosine phosphatase, receptor type, S) 
GTGTAGCTGC 0.07374 0.004647 3128 Pitpn (phosphatidylinositol transfer protein) 
TAGCTCAGGC 10 0.0253 0.001082 153891 Ptp4a3 (protein tyrosine phosphatase 4a3) 
TGGGGGCCCC 13 0.05821 0.012192 276367 Efemp2 (epidermal growth factor-containing fibulin-like extracellular matrix protein 2) 
GGTCCAAGAG 27 41 17 0.08045 0.001603 298728 Nisch (nischarin) 
ATTTGAAATA 12 21 0.10539 0.014242 196464 Gnai2 (guanine nucleotide binding protein, alpha inhibiting 2) 
GGAGGGATCA 15 29 13 0.03479 0.013535 274846 Ilk (integrin linked kinase) 
ACGTTTGTGG 20 10 0.01383 0.057766 271249 Ppp2r3a [protein phosphatase 2 (formerly 2A), regulatory subunit B″, α] 
ATCCGCACCC 11 0.01433 0.030314 288630 Calm3 (calmodulin 3) 
GCTTCTCCCT 0.01419 0.033196 216227 Csnk1d (casein kinase 1, δ) 
TAACGCCCTT 17 13 0.01209 0.330915 8385 Mapk3 (mitogen activated protein kinase 3) 
CCGGACGAGG 10 0.00705 0.05332 2343 Ppp1r14a [protein phosphatase 1, regulatory (inhibitor) subunit 14A] 
GACTGACGAG 10 0.00118 0.240611 19080 Gtpbp1 (GTP binding protein 1) 
TATCCAGCCA 0.00676 0.23157 295226 Dgkz (diacylglycerol kinase ζ) 
CATTAAATGA 0.00834 0.018837 41933 Pitrm1 (pitrilysin metalloprotease 1) 
GGAAACCTGA na 0.003638 175989 1810015H18Rik (RIKEN cDNA 1810015H18 gene) 
AGAGACAAGG 24 0.02696 0.002955 30837 Ndr1 (N-myc downstream regulated 1; Ndrg1 – Mouse Genome Informatics) 
Tag number
SAGE tagE12E13E15P_12 v 13P_13 v 15Unigene Mm.Gene symbol (and name or description)
GGCTTCCGCG 24 62 13 4.3E-05 906 Mdk (midkine) 
TAGTTCCGAC 11 29 11 0.00571 0.003967 30195 Gps1 (G protein pathway suppressor 1) 
CATTTTCTGG 101 60 30 0.00026 0.001459 3862 Igf2 (insulin-like growth factor 2) 
TAACCGTTTT 32 25 0.1594 0.001269 273117 Grb10 (growth factor receptor bound protein 10) 
GAAGGTTCTA 12 11 0.42377 0.012708 289681 Dtr (diphtheria toxin receptor) 
GGGACCGAAA 32 32 0.6218 0.000313 302504 Rbp1 (retinol binding protein 1, cellular) 
GAAAGCAATG 28 30 13 0.58273 0.009037 90787 Ngfrap1 [nerve growth factor receptor (TNFRSF16) associated protein 1] 
GGCAGATGGA 0.23288 0.010862 3542 Pthr1 (parathyroid hormone receptor 1) 
TCCCTGACTT 12 23 0.0601 8.33E-05 2769 Mlp (MARCKS-like protein) 
GGTTTTGTTT 12 0.04861 0.001818 307022 Wsb1 (WD-40-repeat-containing protein with a SOCS box 1) 
CCCCTCTTCC 10 21 0.05677 0.000193 292208 Hdgf (hepatoma-derived growth factor) 
GGGAACAACT 0.08066 0.010862 8687 Cap1 [adenylyl cyclase-associated CAP protein homolog 1 (S. cerevisiae, S. pombe)] 
ATAATGAATA 31 43 15 0.14153 0.00018 157069 Dlk1 [delta-like 1 homolog (Drosophila)] 
TGGGGACCTG 11 0.07143 0.012708 2402 Rhoip3 (Rho interacting protein 3; AA536749 – Mouse Genome Informatics) 
GAGGACCTGG 0.07374 0.004647 258771 Ptprs (protein tyrosine phosphatase, receptor type, S) 
GTGTAGCTGC 0.07374 0.004647 3128 Pitpn (phosphatidylinositol transfer protein) 
TAGCTCAGGC 10 0.0253 0.001082 153891 Ptp4a3 (protein tyrosine phosphatase 4a3) 
TGGGGGCCCC 13 0.05821 0.012192 276367 Efemp2 (epidermal growth factor-containing fibulin-like extracellular matrix protein 2) 
GGTCCAAGAG 27 41 17 0.08045 0.001603 298728 Nisch (nischarin) 
ATTTGAAATA 12 21 0.10539 0.014242 196464 Gnai2 (guanine nucleotide binding protein, alpha inhibiting 2) 
GGAGGGATCA 15 29 13 0.03479 0.013535 274846 Ilk (integrin linked kinase) 
ACGTTTGTGG 20 10 0.01383 0.057766 271249 Ppp2r3a [protein phosphatase 2 (formerly 2A), regulatory subunit B″, α] 
ATCCGCACCC 11 0.01433 0.030314 288630 Calm3 (calmodulin 3) 
GCTTCTCCCT 0.01419 0.033196 216227 Csnk1d (casein kinase 1, δ) 
TAACGCCCTT 17 13 0.01209 0.330915 8385 Mapk3 (mitogen activated protein kinase 3) 
CCGGACGAGG 10 0.00705 0.05332 2343 Ppp1r14a [protein phosphatase 1, regulatory (inhibitor) subunit 14A] 
GACTGACGAG 10 0.00118 0.240611 19080 Gtpbp1 (GTP binding protein 1) 
TATCCAGCCA 0.00676 0.23157 295226 Dgkz (diacylglycerol kinase ζ) 
CATTAAATGA 0.00834 0.018837 41933 Pitrm1 (pitrilysin metalloprotease 1) 
GGAAACCTGA na 0.003638 175989 1810015H18Rik (RIKEN cDNA 1810015H18 gene) 
AGAGACAAGG 24 0.02696 0.002955 30837 Ndr1 (N-myc downstream regulated 1; Ndrg1 – Mouse Genome Informatics) 
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