Exon–intron boundary sequences and splice site strength parameters of T. rubripes FoxK1-α
| Exon . | Size (bp) . | Donor (3′ boundary) Sequence . | Score . | Acceptor (5′ boundary) Sequence . | Score . |
|---|---|---|---|---|---|
| 1 | 435 | CCAGAGAgtaagtgc | 0.99 | ||
| 2 | 216 | CCATCAGgtgagaag | 0.99 | ttttctagGTGTGTG | 0.99 |
| 3 | 199 | CCCAAAGgtgaagtc | 0.54* | tccttcagCGTTCCC | 0.63* |
| 4 | 147 | CTGGCAGgtgggccc | 0.64* | ttttccagGATGAGT | 0.99 |
| 5 | 194 | CCTCCAGgtgagtgg | 0.99 | cttttcagAACTCCA | 0.89 |
| 6 | 173 | GCTCCAGgtgagtct | 1.00 | ttctacagAAGCGCC | 0.99 |
| 7 | 312 | ctccgtagGATCTCC | 0.92 |
| Exon . | Size (bp) . | Donor (3′ boundary) Sequence . | Score . | Acceptor (5′ boundary) Sequence . | Score . |
|---|---|---|---|---|---|
| 1 | 435 | CCAGAGAgtaagtgc | 0.99 | ||
| 2 | 216 | CCATCAGgtgagaag | 0.99 | ttttctagGTGTGTG | 0.99 |
| 3 | 199 | CCCAAAGgtgaagtc | 0.54* | tccttcagCGTTCCC | 0.63* |
| 4 | 147 | CTGGCAGgtgggccc | 0.64* | ttttccagGATGAGT | 0.99 |
| 5 | 194 | CCTCCAGgtgagtgg | 0.99 | cttttcagAACTCCA | 0.89 |
| 6 | 173 | GCTCCAGgtgagtct | 1.00 | ttctacagAAGCGCC | 0.99 |
| 7 | 312 | ctccgtagGATCTCC | 0.92 |
Exonic and intronic sequences are represented in upper and lower case,respectively. Exon–intron boundaries are highlighted in bold. *Splice site scores that are significantly lower than the mean value (P=0.02)