Table 2.

Transcripts preferentially expressed in huCD4-positive cells

Probe set number*Gene†Symbol†Fold change (log2)‡
1422903_at lymphocyte antigen 86 Ly86 4.08 
1419627_s_at C-type lectin domain family 4, member n Clec4n 3.82 
1448148_at granulin Grn 3.80 
1448617_at CD53 antigen Cd53 3.74 
1450241_a_at ecotropic viral integration site 2a Evi2a 3.61 
1454268_a_at cytochrome b-245, alpha polypeptide Cyba 3.54 
1451941_a_at Fc receptor, IgG, low affinity llb Fcgr2b 3.52 
1448891_at macrophage scavenger receptor 2 Msr2 3.38 
1417963_at phospholipid transfer protein Pltp 3.30 
1431724_a_at purinergic receptor P2Y, G-protein coupled 12 P2ry12 3.26 
1449556_at histocompatibility 2, T region locus 23 H2-T23 3.25 
1425951_a_at C-type lectin domain family 4, member n Clec4n 3.20 
1426454_at Rho, GDP dissociation inhibitor (GDI) beta Arhgdib 3.18 
1450678_at integrin beta 2 Itgb2 3.01 
1425519_a_at CD74 antigen Cd74 2.97 
1427076_at macrophage expressed gene 1 Mpeg1 2.94 
1449918_at CD209g antigen Cd209g 2.86 
1419482_at complement component 3a receptor 1 C3ar1 2.84 
1416326_at cysteine-rich protein 1 (intestinal) Crip1 2.79 
1425214_at pyrimidinergic receptor P2Y, G-protein coupled, 6 P2ry6 2.72 
1423805_at disabled homolog 2 (Drosophila) Dab2 2.70 
1449971_a_at CD209f antigen Cd209f 2.54 
1452544_x_at histocompatibility 2, D region locus 1 H2-D1 2.47 
1435476_a_at Fc receptor, IgG, low affinity llb Fcgr2b 2.46 
1451386_at biliverdin reductase B [flavin reductase (NADPH)] Blvrb 2.43 
1419043_a_at interferon inducible GTPase 1 ligp1 2.42 
1427329_a_at immunoglobulin heavy chain 6 (heavy chain of IgM) lgh-6 2.41 
1423266_at RIKEN cDNA 2810405K02 gene 2810405K02Rik 2.37 
1450919_at membrane protein, palmitoylated Mpp1 2.31 
1416246_a_at coronin, actin binding protein 1A Coro1a 2.29 
1427301_at CD48 antigen Cd48 2.28 
1452231_x_at interferon activated gene 203 lfi203 2.19 
1417268_at CD14 antigen Cd14 2.18 
1448160_at lymphocyte cytosolic protein 1 Lcp1 2.13 
1424542_at S100 calcium binding protein A4 S100a4 2.07 
1419027_s_at glycolipid transfer protein Gltp 2.06 
1417869_s_at cathepsin Z Ctsz 2.06 
1416816_at NIMA (never in mitosis gene a)-related expressed kinase 7 Nek7 2.05 
1448944_at neuropilin 1 Nrp1 1.96 
1419144_at CD 163 antigen Cd163 1.95 
1448276_at tetraspanin 4 Tspan4 1.92 
1435375_at cDNA sequence BC052328 BC052328 1.88 
1426918_at integrin beta 1 (fibronectin receptor beta) ltgb1 1.88 
1451683_x_at similar to H-2 class I histocompatibility antigen, L-D alpha chain precursor LOC547343 1.86 
1417491_at cathepsin B Ctsb 1.84 
1434036_at metastasis suppressor 1 Mtss1 1.81 
1448748_at pleckstrin Plek 1.77 
1419282_at chemokine (C-C motif) ligand 12 Ccl12 1.77 
1416985_at signal-regulatory protein alpha Sirpa 1.77 
1455269_a_at coronin, actin binding protein 1A Coro1a 1.77 
1423166_at CD36 antigen Cd36 1.72 
1423570_at ATP-binding cassette, sub-family G (WHITE), member 1 Abcg1 1.70 
1418641_at lymphocyte cytosolic protein 2 Lcp2 1.65 
1419120_at lymphoblastomic leukemia Lyl1 1.63 
1423653_at ATPase, Na+/K+ transporting, alpha 1 polypeptide Atp1a1 1.61 
1417162_at transmembrane BAX inhibitor motif containing 1 Tmbim1 1.52 
1450040_at tissue inhibitor of metalloproteinase 2 Timp2 1.51 
1448239_at heme oxygenase (decycling) 1 Hmox1 1.50 
1455393_at - - 1.49 
1417676_a_at protein tyrosine phosphatase, receptor type, O Ptpro 1.46 
1417561_at apolipoprotein C-l Apoc1 1.44 
1420464_s_at paired-lg-like receptor A1 Pira1 1.44 
1418747_at SFFV proviral integration 1 Sfpi1 1.40 
1420911_a_at milk fat globule-EGF factor 8 protein Mfge8 1.38 
1428340_s_at ATPase type 13A2 Atp13a2 1.36 
1450107_a_at renin binding protein Renbp 1.34 
1452169_a_at diacylglycerol kinase zeta Dgkz 1.25 
1416897_at poly (ADP-ribose) polymerase family, member 9 Parp9 1.14 
1428369_s_at Rho GTPase activating protein 21 Arhgap21 1.14 
1448797_at ELK3, member of ETS oncogene family Elk3 1.14 
1428369_s_at Rho GTPase activating protein 21 Arhgap21 1.14 
1448797_at ELK3, member of ETS oncogene family Elk3 1.14 
1415892_at sphingosine phosphate lyase 1 Sgp/1 1.14 
1423757_x_at insulin-like growth factor binding protein 4 lgfbp4 1.14 
1424778_at DNA segment, Chr 10, University of California at Los Angeles 1 Reep3 1.13 
1424394_at selenoprotein M Selm 1.12 
1451041_at Rho-associated coiled-coil containing protein kinase 2 Rock2 1.11 
1423153_x_at complement component factor h Cfh 1.11 
1450026_a_at UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 B3gnt2 1.09 
1426663_s_at solute carrier family 45, member 3 Slc45a3 1.08 
1425609_at neutrophil cytosolic factor 1 Ncf1 1.07 
1426376_at receptor accessory protein 5 Reep5 1.07 
1450105_at - - 1.07 
1448957_at recombining binding protein suppressor of hairless (Drosophila) Rbpsuh 1.05 
1418394_a_at CD97 antigen Cd97 1.04 
1424769_s_at caldesmon 1 Cald1 1.01 
Probe set number*Gene†Symbol†Fold change (log2)‡
1422903_at lymphocyte antigen 86 Ly86 4.08 
1419627_s_at C-type lectin domain family 4, member n Clec4n 3.82 
1448148_at granulin Grn 3.80 
1448617_at CD53 antigen Cd53 3.74 
1450241_a_at ecotropic viral integration site 2a Evi2a 3.61 
1454268_a_at cytochrome b-245, alpha polypeptide Cyba 3.54 
1451941_a_at Fc receptor, IgG, low affinity llb Fcgr2b 3.52 
1448891_at macrophage scavenger receptor 2 Msr2 3.38 
1417963_at phospholipid transfer protein Pltp 3.30 
1431724_a_at purinergic receptor P2Y, G-protein coupled 12 P2ry12 3.26 
1449556_at histocompatibility 2, T region locus 23 H2-T23 3.25 
1425951_a_at C-type lectin domain family 4, member n Clec4n 3.20 
1426454_at Rho, GDP dissociation inhibitor (GDI) beta Arhgdib 3.18 
1450678_at integrin beta 2 Itgb2 3.01 
1425519_a_at CD74 antigen Cd74 2.97 
1427076_at macrophage expressed gene 1 Mpeg1 2.94 
1449918_at CD209g antigen Cd209g 2.86 
1419482_at complement component 3a receptor 1 C3ar1 2.84 
1416326_at cysteine-rich protein 1 (intestinal) Crip1 2.79 
1425214_at pyrimidinergic receptor P2Y, G-protein coupled, 6 P2ry6 2.72 
1423805_at disabled homolog 2 (Drosophila) Dab2 2.70 
1449971_a_at CD209f antigen Cd209f 2.54 
1452544_x_at histocompatibility 2, D region locus 1 H2-D1 2.47 
1435476_a_at Fc receptor, IgG, low affinity llb Fcgr2b 2.46 
1451386_at biliverdin reductase B [flavin reductase (NADPH)] Blvrb 2.43 
1419043_a_at interferon inducible GTPase 1 ligp1 2.42 
1427329_a_at immunoglobulin heavy chain 6 (heavy chain of IgM) lgh-6 2.41 
1423266_at RIKEN cDNA 2810405K02 gene 2810405K02Rik 2.37 
1450919_at membrane protein, palmitoylated Mpp1 2.31 
1416246_a_at coronin, actin binding protein 1A Coro1a 2.29 
1427301_at CD48 antigen Cd48 2.28 
1452231_x_at interferon activated gene 203 lfi203 2.19 
1417268_at CD14 antigen Cd14 2.18 
1448160_at lymphocyte cytosolic protein 1 Lcp1 2.13 
1424542_at S100 calcium binding protein A4 S100a4 2.07 
1419027_s_at glycolipid transfer protein Gltp 2.06 
1417869_s_at cathepsin Z Ctsz 2.06 
1416816_at NIMA (never in mitosis gene a)-related expressed kinase 7 Nek7 2.05 
1448944_at neuropilin 1 Nrp1 1.96 
1419144_at CD 163 antigen Cd163 1.95 
1448276_at tetraspanin 4 Tspan4 1.92 
1435375_at cDNA sequence BC052328 BC052328 1.88 
1426918_at integrin beta 1 (fibronectin receptor beta) ltgb1 1.88 
1451683_x_at similar to H-2 class I histocompatibility antigen, L-D alpha chain precursor LOC547343 1.86 
1417491_at cathepsin B Ctsb 1.84 
1434036_at metastasis suppressor 1 Mtss1 1.81 
1448748_at pleckstrin Plek 1.77 
1419282_at chemokine (C-C motif) ligand 12 Ccl12 1.77 
1416985_at signal-regulatory protein alpha Sirpa 1.77 
1455269_a_at coronin, actin binding protein 1A Coro1a 1.77 
1423166_at CD36 antigen Cd36 1.72 
1423570_at ATP-binding cassette, sub-family G (WHITE), member 1 Abcg1 1.70 
1418641_at lymphocyte cytosolic protein 2 Lcp2 1.65 
1419120_at lymphoblastomic leukemia Lyl1 1.63 
1423653_at ATPase, Na+/K+ transporting, alpha 1 polypeptide Atp1a1 1.61 
1417162_at transmembrane BAX inhibitor motif containing 1 Tmbim1 1.52 
1450040_at tissue inhibitor of metalloproteinase 2 Timp2 1.51 
1448239_at heme oxygenase (decycling) 1 Hmox1 1.50 
1455393_at - - 1.49 
1417676_a_at protein tyrosine phosphatase, receptor type, O Ptpro 1.46 
1417561_at apolipoprotein C-l Apoc1 1.44 
1420464_s_at paired-lg-like receptor A1 Pira1 1.44 
1418747_at SFFV proviral integration 1 Sfpi1 1.40 
1420911_a_at milk fat globule-EGF factor 8 protein Mfge8 1.38 
1428340_s_at ATPase type 13A2 Atp13a2 1.36 
1450107_a_at renin binding protein Renbp 1.34 
1452169_a_at diacylglycerol kinase zeta Dgkz 1.25 
1416897_at poly (ADP-ribose) polymerase family, member 9 Parp9 1.14 
1428369_s_at Rho GTPase activating protein 21 Arhgap21 1.14 
1448797_at ELK3, member of ETS oncogene family Elk3 1.14 
1428369_s_at Rho GTPase activating protein 21 Arhgap21 1.14 
1448797_at ELK3, member of ETS oncogene family Elk3 1.14 
1415892_at sphingosine phosphate lyase 1 Sgp/1 1.14 
1423757_x_at insulin-like growth factor binding protein 4 lgfbp4 1.14 
1424778_at DNA segment, Chr 10, University of California at Los Angeles 1 Reep3 1.13 
1424394_at selenoprotein M Selm 1.12 
1451041_at Rho-associated coiled-coil containing protein kinase 2 Rock2 1.11 
1423153_x_at complement component factor h Cfh 1.11 
1450026_a_at UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 B3gnt2 1.09 
1426663_s_at solute carrier family 45, member 3 Slc45a3 1.08 
1425609_at neutrophil cytosolic factor 1 Ncf1 1.07 
1426376_at receptor accessory protein 5 Reep5 1.07 
1450105_at - - 1.07 
1448957_at recombining binding protein suppressor of hairless (Drosophila) Rbpsuh 1.05 
1418394_a_at CD97 antigen Cd97 1.04 
1424769_s_at caldesmon 1 Cald1 1.01 
*

Probe set number relative to the Mouse Genome 430A 2.0 (Affymetrix).

†

Official gene name and symbol according to NCBI.

‡

Fold change (log2) between huCD4-positive and -negative samples.

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