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Keywords: Genomics
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Journal Articles
J Exp Biol (2020) 223 (24): jeb191262.
Published: 17 December 2020
.... Transcriptomics Metabolomics Genomics RNA-seq Hypothesis testing References Akashi , H. D. , Diaz , A. C. , Shigenobu , S. , Makino , T. and Kawata , M. ( 2016 ). Differentially expressed genes associated with adaptation to different thermal environments in three sympatric...
Journal Articles
J Exp Biol (2019) 222 (Suppl_1): jeb191890.
Published: 6 February 2019
..., suggesting an epigenetic control of their migration. The genes and epigenetic changes underpinning migratory behaviour remain largely unknown. The revolution in (epi)genomics and functional genomic tools holds great promise to rapidly move the field of migration genetics forward. Here, we review our current...
Journal Articles
J Exp Biol (2018) 221 (8): jeb176917.
Published: 25 April 2018
... in aggression in the honey bee. Behavioral plasticity Genomics Neural energetics Alzheimer's disease Traumatic brain injury Fig. 1. Alarm pheromone exposure is associated   with declines in brain mitochondrial respiration in the honey bee, Apis mellifera . Following exposure to alarm...
Includes: Supplementary data
Journal Articles
J Exp Biol (2018) 221 (5): jeb170670.
Published: 12 March 2018
... Aubin-Horth , N. and Renn , S. C. P. ( 2009 ). Genomic reaction norms: using integrative biology to understand molecular mechanisms of phenotypic plasticity . Mol. Ecol.   18 , 3763 - 3780 . 10.1111/j.1365-294X.2009.04313.x Belinky , F. , Nativ , N. , Stelzer , G...
Includes: Supplementary data
Journal Articles
J Exp Biol (2015) 218 (1): 114–122.
Published: 1 January 2015
... at a molecular level; however, recent progress on sequencing technology and genome editing tools have begun to blur the lines between model and non-model organisms, opening numerous new avenues for investigation. Here, I review examples of epigenetic phenomena in non-model organisms that have emerged...
Journal Articles
J Exp Biol (2013) 216 (18): 3474–3482.
Published: 15 September 2013
... spots out of 45,220. Because the microarray was designed from EST sequence rather than genomic data, stringent annotation criteria based on orthology to the honey bee ( Apis mellifera ) genome ( Honeybee Genome Sequencing Consortium, 2006 ) were used to minimize the chances of including data from...
Includes: Supplementary data
Journal Articles
J Exp Biol (2011) 214 (10): 1773–1782.
Published: 15 May 2011
... is monitoring for changes in their phototactic behavior. In most arthropods, histamine has been shown to play a key role in the visual system. Currently, nothing is known about histaminergic signaling in either D. magna or D. pulex . Here, a combination of immunohistochemistry and genome mining was used...
Journal Articles
J Exp Biol (2008) 211 (22): 3636–3649.
Published: 15 November 2008
... The Company of Biologists Limited 2008 2008 fish genomics Gillichthys mirabilis microarray osmotic salinity signaling stress transcriptome Osmolality is a pervasive abiotic factor that has a strong influence on cellular and organismal function ( Somero and Yancey, 1997 ; Kültz...
Includes: Supplementary data
Journal Articles
J Exp Biol (2007) 210 (11): 1847–1857.
Published: 1 June 2007
... to combining genomic and physiological studies, one must bear in mind that the massive datasets associated with genomic studies need to be further enlarged to enable estimates of individual variation. It is also important to remember that microarray and proteomic data give the levels of mRNA and proteins...
Journal Articles
J Exp Biol (2007) 210 (9): 1607–1612.
Published: 1 May 2007
...Stuart K. Kim SUMMARY Development of functional genomics tools has made it possible to define the aging process by performing genome-wide scans for transcriptional differences between the young and the old. Global screens for age regulation have been performed for worms and flies, as well as many...
Includes: Supplementary data
Journal Articles
J Exp Biol (2007) 210 (9): 1622–1631.
Published: 1 May 2007
... multi-component systems. Systems biology has emerged in the post-genome era as the successor to reductionism. In my opinion, systems biology and physiology are synonymous. Both disciplines seek to understand multi-component processes or `systems' and the underlying pathways of information flow from...
Includes: Supplementary data
Journal Articles
J Exp Biol (2007) 210 (9): 1497–1506.
Published: 1 May 2007
...Piero Carninci SUMMARY The principal route to understanding the biological significance of the genome sequence comes from discovery and characterization of that portion of the genome that is transcribed into RNA products. We now know that this`transcriptome' is unexpectedly complex and its precise...
Includes: Supplementary data
Journal Articles
J Exp Biol (2006) 209 (14): 2660–2677.
Published: 15 July 2006
... Environmental Biology, University of Southern California, 3616 Trousdale Parkway, #107, Mail Code 0371 Los Angeles, CA 90089, USA 24 4 2006 © The Company of Biologists Limited 2006 2006 genomics transcriptome stress fish heat shock goby Gillichthys mirabilis The coordinated...
Includes: Supplementary data
Journal Articles
J Exp Biol (2004) 207 (15): 2551–2563.
Published: 1 July 2004
... (transmission blocking vaccines), genetic manipulation or chemical incapacitation of the vector. During the past decade, mosquito research has been energized by several breakthroughs, including the successful transformation of anopheline vectors, analysis of gene function by RNAi,genome-wide expression...
Journal Articles
J Exp Biol (2003) 206 (21): 3789–3802.
Published: 1 November 2003
...D. L. Doolan; J. C. Aguiar; W. R. Weiss; A. Sette; P. L. Felgner; D. P. Regis; P. Quinones-Casas; J. R. Yates, III; P. L. Blair; T. L. Richie; S. L. Hoffman; D. J. Carucci SUMMARY Recent advances in the fields of genomics, proteomics and molecular immunology offer tremendous opportunities...
Journal Articles
J Exp Biol (2002) 205 (16): 2429–2451.
Published: 15 August 2002
... salivary gland malaria proteomics transcriptome genomics blood-sucking insect To our knowledge, Table 4 is the first attempt to create a comprehensive catalog of the cDNAs from the A. gambiae salivary gland coding for putative secretory proteins. It is clear from this set of cDNAs...