1-20 of 22
Keywords: Transcriptome
Close
Follow your search
Access your saved searches in your account

Would you like to receive an alert when new items match your search?
Close Modal
Sort by
Journal Articles
In collection:
Reproductive biology
Journal: Development
Development (2022) 149 (19): dev200497.
Published: 12 October 2022
... 7 9 2022 © 2022. Published by The Company of Biologists Ltd 2022 Summary: The important role of RNA terminal phosphate cyclase B-regulated non-canonical splicing in female reproduction and the mechanisms involved. RNA processing Transcriptome Female fertility Premature...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2019) 146 (10): dev173328.
Published: 28 May 2019
... vertebrate organogenesis. However, little is known about the cellular heterogeneity of the mesenchymal progenitors in early limb buds that ultimately contribute to the chondrogenic condensations prefiguring the skeleton. We combined flow cytometric and transcriptome analyses to identify the molecular...
Includes: Supplementary data
Journal Articles
In collection:
Neural development
Journal: Development
Development (2019) 146 (12): dev174284.
Published: 1 April 2019
... single cell RNA sequencing to profile transcriptomes of dissociated cells from the diencephalon of E12.5 mouse embryos. We identified the divergence of different progenitors, intermediate progenitors, and emerging neurons. By mapping the identified cell groups to their spatial origins, we characterized...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2019) 146 (4): dev166017.
Published: 15 February 2019
.... However, the cellular and molecular basis of tail regeneration in amphioxus remains largely ill-defined. We confirmed that the tail regeneration of amphioxus Branchiostoma japonicum is a vertebrate-like epimorphosis process. We performed transcriptome analysis of tail regenerates, which provided many...
Includes: Supplementary data
Journal Articles
In collection:
Human development
Journal: Development
Development (2019) 146 (2): dev169474.
Published: 29 January 2019
...; Majlinda Lako ABSTRACT The scarcity of embryonic/foetal material as a resource for direct study means that there is still limited understanding of human retina development. Here, we present an integrated transcriptome analysis combined with immunohistochemistry in human eye and retinal samples from 4 to 19...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2018) 145 (10): dev162867.
Published: 17 May 2018
... organism. This interest has been further fueled by the advent of high-throughput transcriptomic analyses that provide virtual mountains of data. Here, we present N ematostella vectensis Embryogenesis and Regeneration Transcriptomics (NvERTx), a platform for comparing gene expression during embryogenesis...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2017) 144 (18): 3375–3387.
Published: 15 September 2017
... a comprehensive Ciona notochord transcriptome. We identify 1364 genes with enriched expression and extensively validate the results by in situ hybridization. These genes are highly enriched for Gene Ontology terms related to the extracellular matrix, cell adhesion and cytoskeleton. Orthologs of 112 of the Ciona...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2017) 144 (15): 2784–2797.
Published: 1 August 2017
... Mouse Transcriptome Dosage compensation of X-linked genes is a crucial epigenetic event that occurs at around the peri-implantation stages to allow successful development of female mice. The X inactive-specific transcript ( Xist ) gene encodes a long noncoding RNA that is monoallelically...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2017) 144 (9): 1584–1587.
Published: 1 May 2017
...J. Gray Camp; Barbara Treutlein Innovative methods designed to recapitulate human organogenesis from pluripotent stem cells provide a means to explore human developmental biology. New technologies to sequence and analyze single-cell transcriptomes can deconstruct these ‘organoids’ into constituent...
Journal Articles
Journal: Development
Development (2017) 144 (7): 1221–1234.
Published: 1 April 2017
... identity upon differentiation immediately follows collapse of the naïve pluripotency transcription factor circuitry and precedes upregulation of lineage-specific factors. ES cells Rex1 Epiblast Methylome Pluripotency Transcriptome Epiblast cells, founders of all somatic cells...
Includes: Supplementary data
Journal Articles
In collection:
Plant development
Journal: Development
Development (2017) 144 (1): 163–172.
Published: 1 January 2017
... in maize anthers, using proteins conserved in Arabidopsis and rice but deployed with distinctive timing. Pre-meiotic male reproduction Regulatory hierarchy Transcriptome Proteome Maize is monoecious, with separate inflorescences producing female-only ears and male-only tassels...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2016) 143 (7): 1217–1227.
Published: 1 April 2016
... the spatiotemporal transcriptome of embryogenesis in rice. The spatial data sets of 3-DAP embryos allowed us to predict the spatial bias of gene expression along the A-B and D-V axes in the globular embryo. Our data also showed temporal changes in the expression levels and sites of individual genes from globular...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2015) 142 (23): 4010–4025.
Published: 1 December 2015
... the same embryo. As predicted by the transcriptomic data, immunolocalization of EOMES, T brachyury, GDF15 and active β-catenin revealed differential expression among blastomeres of 8- to 10-cell human embryos. The UCSFB lines formed derivatives of the three germ layers and CDX2-positive progeny, from which...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2014) 141 (24): 4649–4655.
Published: 15 December 2014
... for correspondence ( irie@bs.s.u-tokyo.ac.jp ; saizo@cdb.riken.jp ) Competing interests The authors declare no competing financial interests. © 2014. Published by The Company of Biologists Ltd 2014 Body plan Evo-devo Evolution Hourglass model Phylotype Transcriptome Animals...
Journal Articles
Journal: Development
Development (2014) 141 (19): 3683–3696.
Published: 1 October 2014
... identified. We have undertaken a transcriptome analysis of mouse limb tendon cells that were isolated at different stages of development based on scleraxis ( Scx ) expression. Microarray comparisons allowed us to establish a list of genes regulated in tendon cells during mouse limb development...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2014) 141 (16): 3266–3276.
Published: 15 August 2014
... of transcriptome change in progressively more differentiated neural cell populations in vivo . Microarray data, validated against direct RNA sequencing, identified: (1) a gene cohort characteristic of the multi-potent stem zone epiblast, which contains neuro-mesodermal progenitors that progressively generate...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2014) 141 (11): 2325–2330.
Published: 1 June 2014
... requires the identification of crucial differentially expressed control genes and, ideally, the determination of the complete transcriptomes of each individual cell type. Here, we have analyzed the transcriptomes of six major tissues dissected from mid-gestational (TS12) mouse embryos. Approximately one...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2013) 140 (22): 4633–4644.
Published: 15 November 2013
... potential of the subgranular zone (SGZ) of the hippocampal dentate gyrus is likely to be regulated by molecular cues arising from its complex heterogeneous cellular environment. Through transcriptome analysis using laser microdissection coupled with DNA microarrays, in combination with analysis of genome...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2013) 140 (13): 2703–2710.
Published: 1 July 2013
... and zygotic transcriptomes during this period. Here we use exome sequencing and RNA-seq to achieve such discrimination and in doing so have identified the first zygotic genes to be expressed in the embryo. Our work revealed different profiles of maternal mRNA post-transcriptional regulation prior to zygotic...
Includes: Supplementary data
Journal Articles
Journal: Development
Development (2013) 140 (5): 959–964.
Published: 1 March 2013
... cells that forms at the distal tip of the leg stump. To identify molecules involved in blastema formation, comparative transcriptome analysis was performed between regenerating and normal unamputated legs. Components of JAK/STAT signalling were upregulated more than twofold in regenerating legs...
Includes: Supplementary data